EnhancerDB
  1. Home
  2. SNP
  3. rs538462600[chr17:48980199]
Enhancers that have rs538462600[chr17:48980199]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538462600[chr17:48980199]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48979947 48980216 ZNF143 GTRD no Epithelial (MCF-7) 21770593
chr17 48980099 48980514 ZNF274 GTRD no Liver (HepG2) 21770594
chr17 48980194 48980199 ETS2 TRANSFAC yes 54731383
chr17 48980199 48980202 MYB TRANSFAC yes 54731384
Genes associated with rs538462600[chr17:48980199], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More