EnhancerDB
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  3. rs538534625[chr5:172273111]
Enhancers that have rs538534625[chr5:172273111]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538534625[chr5:172273111]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172273099 172273113 EBF1 JASPAR yes 67833953
chr5 172273100 172273111 EBF1 JASPAR yes 67833954
chr5 172273101 172273112 EBF1 JASPAR yes 67833955
chr5 172273110 172273114 H4TF2 TRANSFAC yes 67833956
Genes associated with rs538534625[chr5:172273111], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More