EnhancerDB
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  3. rs538541081[chr11:10349892]
Enhancers that have rs538541081[chr11:10349892]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 10333742 10351115 enh1638
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs538541081[chr11:10349892]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 10349602 10352445 ZNF274 GTRD no Cervix (HeLa-S3) 21469519
chr11 10349602 10352445 ZNF274 GTRD no Cervix (HeLa-S3) 107956789
chr11 10349825 10350924 TCF7L2 GTRD no Colon (HCT116) 21469520
chr11 10349825 10350924 TCF7L2 GTRD no Colon (HCT116) 107956790
chr11 10349872 10349893 ZNF263 JASPAR yes 37308135
chr11 10349878 10349893 PRDM1 JASPAR yes 37308136
chr11 10349879 10349893 TCF7L2 JASPAR yes 37308137
chr11 10349879 10349894 LEF1 JASPAR yes 37308138
chr11 10349881 10351230 TCF7L2 GTRD no Colon (HCT116) 21469521
chr11 10349881 10351230 TCF7L2 GTRD no Colon (HCT116) 107956791
chr11 10349883 10349897 SPI1 JASPAR yes 37308139
chr11 10349883 10349897 SPIC JASPAR yes 37308140
chr11 10349889 10349894 ETS2 TRANSFAC yes 37308141
chr11 10349890 10349902 IRF1 JASPAR yes 37308142
Genes associated with rs538541081[chr11:10349892], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More