EnhancerDB
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  3. rs538545379[chr16:3902170]
Enhancers that have rs538545379[chr16:3902170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 3901576 3926575 enh3861
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538545379[chr16:3902170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 3902152 3902173 IRF1 JASPAR yes 9234817
chr16 3902153 3902174 IRF1 JASPAR yes 9234819
chr16 3902154 3902175 IRF1 JASPAR yes 9234823
chr16 3902155 3902170 FOXP1 JASPAR yes 9234824
chr16 3902155 3902176 IRF1 JASPAR yes 9234825
chr16 3902156 3902177 IRF1 JASPAR yes 9234826
chr16 3902157 3902172 FOXP1 JASPAR yes 9234827
chr16 3902157 3902178 IRF1 JASPAR yes 9234828
chr16 3902158 3902173 FOXP1 JASPAR yes 9234829
chr16 3902158 3902179 IRF1 JASPAR yes 9234830
chr16 3902159 3902174 FOXP1 JASPAR yes 9234831
chr16 3902159 3902180 IRF1 JASPAR yes 9234832
chr16 3902160 3902175 FOXP1 JASPAR yes 9234833
chr16 3902160 3902181 IRF1 JASPAR yes 9234834
chr16 3902161 3902176 FOXP1 JASPAR yes 9234835
chr16 3902161 3902182 IRF1 JASPAR yes 9234836
chr16 3902162 3902177 FOXP1 JASPAR yes 9234837
chr16 3902162 3902183 IRF1 JASPAR yes 9234838
chr16 3902163 3902178 FOXP1 JASPAR yes 9234839
chr16 3902163 3902184 IRF1 JASPAR yes 9234840
chr16 3902164 3902179 FOXP1 JASPAR yes 9234841
chr16 3902165 3902180 FOXP1 JASPAR yes 9234842
chr16 3902166 3902181 FOXP1 JASPAR yes 9234843
chr16 3902167 3902182 FOXP1 JASPAR yes 9234844
chr16 3902168 3902183 FOXP1 JASPAR yes 9234845
chr16 3902169 3902184 FOXP1 JASPAR yes 9234846
chr16 3902170 3902185 FOXP1 JASPAR yes 9234847
Genes associated with rs538545379[chr16:3902170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More