EnhancerDB
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  3. rs538588708[chr1:212766779]
Enhancers that have rs538588708[chr1:212766779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212765205 212784697 enh12647
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs538588708[chr1:212766779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212766772 212766787 FOXP1 JASPAR yes 35139080
chr1 212766774 212766789 FOXP1 JASPAR yes 35139081
chr1 212766774 212766789 MEF2C JASPAR yes 35139082
chr1 212766775 212766796 IRF1 JASPAR yes 35139083
chr1 212766776 212766780 TEAD2 TRANSFAC yes 35139084
chr1 212766776 212766781 TBP TRANSFAC yes 35139085
chr1 212766776 212766782 TFIID TRANSFAC yes 35139086
chr1 212766776 212766791 FOXP1 JASPAR yes 35139087
chr1 212766778 212766784 TBP TRANSFAC yes 35139088
chr1 212766779 212766794 PRDM1 JASPAR yes 35139089
chr1 212766779 212766794 STAT2 JASPAR yes 35139090
Genes associated with rs538588708[chr1:212766779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More