EnhancerDB
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  3. rs538633309[chr16:85258944]
Enhancers that have rs538633309[chr16:85258944]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538633309[chr16:85258944]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85257855 85259434 ZNF143 GTRD no Epithelial (MCF-7) 21721558
chr16 85257967 85260329 TCF7L2 GTRD no Colon (HCT116) 21721559
chr16 85257969 85258965 ZNF143 GTRD no Epithelial (MCF-7) 21721560
chr16 85258061 85259016 ZNF143 GTRD no Epithelial (MCF-7) 21721562
chr16 85258105 85260305 TCF7L2 GTRD no Colon (HCT116) 21721563
chr16 85258107 85260265 TCF7L2 GTRD no Colon (HCT116) 21721564
chr16 85258143 85260208 TCF7L2 GTRD no Colon (HCT116) 21721565
chr16 85258234 85260260 TCF7L2 GTRD no Colon (HCT116) 21721566
chr16 85258422 85259351 ZNF274 GTRD no Bone Marrow (K562) 21721567
chr16 85258436 85259556 TCF7L2 GTRD no Colon (HCT116) 21721568
chr16 85258459 85259019 ZNF274 GTRD no Liver (HepG2) 21721569
chr16 85258589 85259095 MYOD GTRD no Muscle (Myoblast) 21721573
chr16 85258631 85259095 ZNF274 GTRD no Blood (GM12878) 21721574
chr16 85258718 85259088 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721575
chr16 85258936 85258946 NFKB1 JASPAR yes 12035141
Genes associated with rs538633309[chr16:85258944], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More