EnhancerDB
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  3. rs538775145[chr1:172318909]
Enhancers that have rs538775145[chr1:172318909]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538775145[chr1:172318909]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172318899 172318909 HOXB13 JASPAR yes 33124321
chr1 172318900 172318910 ALX3 JASPAR yes 33124322
chr1 172318900 172318910 EN2 JASPAR yes 33124323
chr1 172318900 172318910 ESX1 JASPAR yes 33124324
chr1 172318900 172318910 GBX2 JASPAR yes 33124325
chr1 172318900 172318910 GSX1 JASPAR yes 33124326
chr1 172318900 172318910 GSX2 JASPAR yes 33124327
chr1 172318900 172318910 HESX1 JASPAR yes 33124328
chr1 172318900 172318910 LBX2 JASPAR yes 33124329
chr1 172318900 172318910 LHX2 JASPAR yes 33124330
chr1 172318900 172318910 MIXL1 JASPAR yes 33124331
chr1 172318900 172318910 RAX JASPAR yes 33124332
chr1 172318901 172318909 BARX1 JASPAR yes 33124333
chr1 172318901 172318909 BSX JASPAR yes 33124334
chr1 172318901 172318909 DLX6 JASPAR yes 33124335
chr1 172318901 172318909 ISX JASPAR yes 33124336
chr1 172318901 172318909 LBX1 JASPAR yes 33124337
chr1 172318901 172318909 LHX9 JASPAR yes 33124338
chr1 172318901 172318909 MSX1 JASPAR yes 33124339
chr1 172318901 172318909 MSX2 JASPAR yes 33124340
chr1 172318901 172318909 NKX6-2 JASPAR yes 33124341
chr1 172318901 172318909 PRRX1 JASPAR yes 33124342
chr1 172318901 172318909 RAX2 JASPAR yes 33124343
chr1 172318901 172318909 SHOX JASPAR yes 33124344
chr1 172318901 172318909 UNCX JASPAR yes 33124345
chr1 172318901 172318914 DUXA JASPAR yes 33124346
chr1 172318902 172318913 PHOX2A JASPAR yes 33124347
chr1 172318905 172318925 PPARG JASPAR yes 33124348
Genes associated with rs538775145[chr1:172318909], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More