EnhancerDB
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  3. rs538806412[chr1:19723284]
Enhancers that have rs538806412[chr1:19723284]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538806412[chr1:19723284]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19723275 19723290 MEF2C JASPAR yes 27185152
chr1 19723275 19723296 IRF1 JASPAR yes 27185153
chr1 19723276 19723291 FOXP1 JASPAR yes 27185154
chr1 19723276 19723297 IRF1 JASPAR yes 27185155
chr1 19723277 19723292 FOXP1 JASPAR yes 27185156
chr1 19723278 19723293 FOXP1 JASPAR yes 27185157
chr1 19723279 19723294 FOXP1 JASPAR yes 27185158
chr1 19723279 19723300 IRF1 JASPAR yes 27185159
chr1 19723280 19723295 FOXP1 JASPAR yes 27185160
chr1 19723280 19723301 IRF1 JASPAR yes 27185161
chr1 19723281 19723296 FOXP1 JASPAR yes 27185162
chr1 19723281 19723302 IRF1 JASPAR yes 27185163
chr1 19723282 19723297 FOXP1 JASPAR yes 27185164
chr1 19723282 19723303 IRF1 JASPAR yes 27185165
chr1 19723283 19723298 FOXP1 JASPAR yes 27185166
Genes associated with rs538806412[chr1:19723284], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More