EnhancerDB
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  3. rs539040607[chr16:69095998]
Enhancers that have rs539040607[chr16:69095998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69081060 69101258 enh31894
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Colon (HCT116) Thyroid Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs539040607[chr16:69095998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69095984 69096004 TBX19 JASPAR yes 11244506
chr16 69095989 69096001 TAL1 JASPAR yes 11244507
chr16 69095990 69096002 BHLHE23 JASPAR yes 11244508
chr16 69095991 69096001 BHLHE22 JASPAR yes 11244509
chr16 69095991 69096001 NEUROD2 JASPAR yes 11244510
chr16 69095991 69096001 OLIG1 JASPAR yes 11244511
chr16 69095991 69096001 OLIG2 JASPAR yes 11244512
chr16 69095991 69096001 OLIG3 JASPAR yes 11244513
chr16 69095991 69096003 TAL1 JASPAR yes 11244514
chr16 69095995 69096003 FOXL1 JASPAR yes 11244515
Genes associated with rs539040607[chr16:69095998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More