EnhancerDB
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  3. rs539049927[chr18:55926568]
Enhancers that have rs539049927[chr18:55926568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55922865 55949275 enh17739
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs539049927[chr18:55926568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55926564 55926574 PAX3 JASPAR yes 110932988
chr18 55926564 55926574 PAX7 JASPAR yes 110932989
Genes associated with rs539049927[chr18:55926568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More