EnhancerDB
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  3. rs539066664[chr3:58047505]
Enhancers that have rs539066664[chr3:58047505]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539066664[chr3:58047505]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58047493 58047505 TAL1 JASPAR yes 2671323
chr3 58047494 58047506 BHLHE23 JASPAR yes 2671325
chr3 58047495 58047505 BHLHE22 JASPAR yes 2671326
chr3 58047495 58047505 NEUROD2 JASPAR yes 2671327
chr3 58047495 58047505 OLIG1 JASPAR yes 2671328
chr3 58047495 58047505 OLIG2 JASPAR yes 2671329
chr3 58047495 58047505 OLIG3 JASPAR yes 2671330
chr3 58047495 58047507 TAL1 JASPAR yes 2671331
Genes associated with rs539066664[chr3:58047505], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More