EnhancerDB
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  3. rs539080623[chr1:8195398]
Enhancers that have rs539080623[chr1:8195398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8164245 8205415 enh11462
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs539080623[chr1:8195398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8193590 8195662 ZBTB33 GTRD no Lung (A549) 107801955
chr1 8193590 8195662 ZBTB33 GTRD no Lung (A549) 107801956
chr1 8195386 8195404 IRF2 JASPAR yes 26517838
chr1 8195387 8195408 IRF1 JASPAR yes 26517839
chr1 8195391 8195403 IRF1 JASPAR yes 26517840
chr1 8195391 8195406 IRF9 JASPAR yes 26517841
chr1 8195393 8195399 TCF4 TRANSFAC yes 26517842
chr1 8195395 8195415 RREB1 JASPAR yes 26517843
Genes associated with rs539080623[chr1:8195398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More