EnhancerDB
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  3. rs539080755[chr1:41879652]
Enhancers that have rs539080755[chr1:41879652]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539080755[chr1:41879652]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41879646 41879656 MAX JASPAR yes 28387237
chr1 41879646 41879658 PKNOX1 JASPAR yes 28387238
chr1 41879646 41879658 PKNOX2 JASPAR yes 28387239
chr1 41879646 41879658 TGIF1 JASPAR yes 28387240
Genes associated with rs539080755[chr1:41879652], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More