EnhancerDB
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  3. rs539147676[chr16:68828858]
Enhancers that have rs539147676[chr16:68828858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 68818509 68829474 enh16745
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs539147676[chr16:68828858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 68828846 68828860 GLIS3 JASPAR yes 11227584
chr16 68828846 68828860 ZIC1 JASPAR yes 11227585
chr16 68828846 68828861 ZIC3 JASPAR yes 11227586
chr16 68828846 68828861 ZIC4 JASPAR yes 11227587
chr16 68828849 68828865 ZNF143 JASPAR yes 11227588
Genes associated with rs539147676[chr16:68828858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More