EnhancerDB
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  3. rs539154161[chr17:80501373]
Enhancers that have rs539154161[chr17:80501373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539154161[chr17:80501373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80501362 80501374 NHLH1 JASPAR yes 56372689
chr17 80501362 80501375 ZBTB18 JASPAR yes 56372690
chr17 80501363 80501373 NHLH1 JASPAR yes 56372691
chr17 80501371 80501381 NKX2-3 JASPAR yes 56372692
Genes associated with rs539154161[chr17:80501373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More