EnhancerDB
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  3. rs539201544[chr1:226896215]
Enhancers that have rs539201544[chr1:226896215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226896121 226896509 vista5384
VISTA
Transcript factors that have rs539201544[chr1:226896215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226896104 226896504 FOS UCSC Txn Factor no Conserved 107876371
chr1 226896137 226896527 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107876372
chr1 226896161 226896517 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21387299
chr1 226896161 226896517 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107876373
chr1 226896183 226896478 MYC UCSC Txn Factor no Conserved 107876374
Genes associated with rs539201544[chr1:226896215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More