EnhancerDB
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  3. rs539222797[chr17:76307010]
Enhancers that have rs539222797[chr17:76307010]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76294130 76316355 enh17406
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539222797[chr17:76307010]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76303874 76310233 ZNF274 GTRD no Liver (HepG2) 108301842
chr17 76306151 76308527 TCF7L2 GTRD no Colon (HCT116) 21793219
chr17 76306333 76308490 TCF7L2 GTRD no Colon (HCT116) 21793220
chr17 76306930 76308247 TCF7L2 GTRD no Colon (HCT116) 21793222
chr17 76307000 76307013 POU2F2 JASPAR yes 56145078
chr17 76307001 76307013 POU3F1 JASPAR yes 56145079
chr17 76307002 76307014 POU2F1 JASPAR yes 56145080
chr17 76307003 76307012 POU3F4 JASPAR yes 56145081
chr17 76307004 76307012 FOXL1 JASPAR yes 56145082
Genes associated with rs539222797[chr17:76307010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More