EnhancerDB
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  3. rs539227767[chr17:2801215]
Enhancers that have rs539227767[chr17:2801215]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs539227767[chr17:2801215]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2801209 2801230 IRF1 JASPAR yes 52784028
chr17 2801211 2801232 IRF1 JASPAR yes 52784029
chr17 2801212 2801227 FOXP1 JASPAR yes 52784030
chr17 2801214 2801229 FOXP1 JASPAR yes 52784031
chr17 2801215 2801230 FOXP1 JASPAR yes 52784032
Genes associated with rs539227767[chr17:2801215], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More