EnhancerDB
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Enhancers that have rs539240980[chr12:109232492]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109230004 109245900 enh14979
Bone Marrow (K562) Brain (SK-N-MC) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr12 109232143 109232504 vista14839
VISTA
Transcript factors that have rs539240980[chr12:109232492]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109231069 109232687 POLR2A UCSC Txn Factor no Conserved 108057682
chr12 109231720 109232607 TCF7L2 UCSC Txn Factor no Conserved 108057684
chr12 109231888 109232492 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571788
chr12 109231888 109232492 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057687
chr12 109231914 109232648 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571790
chr12 109231914 109232648 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057689
chr12 109231959 109232643 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571791
chr12 109231959 109232643 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057690
chr12 109231986 109232562 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571792
chr12 109231986 109232562 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057691
chr12 109231986 109232646 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571793
chr12 109231986 109232646 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057692
chr12 109231995 109232571 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108057695
chr12 109232001 109232591 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571797
chr12 109232001 109232591 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057697
chr12 109232011 109232607 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21571799
chr12 109232011 109232607 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108057699
chr12 109232022 109232652 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571800
chr12 109232022 109232652 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057700
chr12 109232024 109232674 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571801
chr12 109232024 109232674 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057701
chr12 109232032 109232531 MYC UCSC Txn Factor no Conserved 108057702
chr12 109232033 109232517 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108057703
chr12 109232033 109232549 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571802
chr12 109232033 109232549 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057704
chr12 109232039 109232635 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571803
chr12 109232039 109232635 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057706
chr12 109232042 109232506 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571804
chr12 109232042 109232506 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057707
chr12 109232043 109232553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571805
chr12 109232043 109232553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057708
chr12 109232053 109232563 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571806
chr12 109232053 109232563 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057709
chr12 109232066 109232586 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108057710
chr12 109232071 109232507 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571807
chr12 109232071 109232507 MAX UCSC Txn Factor no Conserved 108057711
chr12 109232071 109232507 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057712
chr12 109232071 109232511 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571808
chr12 109232071 109232511 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057713
chr12 109232076 109232546 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21571809
chr12 109232076 109232546 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108057714
chr12 109232085 109232525 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108057716
chr12 109232086 109232522 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571811
chr12 109232086 109232522 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057717
chr12 109232102 109232506 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571814
chr12 109232102 109232506 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057720
chr12 109232102 109232512 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571815
chr12 109232102 109232512 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057721
chr12 109232109 109232513 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571817
chr12 109232109 109232513 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057723
chr12 109232116 109232496 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571820
chr12 109232116 109232496 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057727
chr12 109232118 109232554 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571821
chr12 109232118 109232554 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057728
chr12 109232123 109232493 EP300 UCSC Txn Factor no Conserved 108057730
chr12 109232131 109232535 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571823
chr12 109232131 109232535 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057731
chr12 109232132 109232549 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571825
chr12 109232132 109232549 RUNX3 UCSC Txn Factor no Conserved 108057734
chr12 109232132 109232549 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057735
chr12 109232133 109232517 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571826
chr12 109232133 109232517 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057736
chr12 109232133 109232534 JUN UCSC Txn Factor no Conserved 108057737
chr12 109232134 109232967 ZNF143 GTRD no Epithelial (MCF-7) 108057738
chr12 109232138 109232534 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571829
chr12 109232138 109232534 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057741
chr12 109232140 109232616 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571830
chr12 109232140 109232616 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057743
chr12 109232141 109232597 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571831
chr12 109232141 109232597 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057744
chr12 109232145 109232521 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571833
chr12 109232145 109232521 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057746
chr12 109232146 109232509 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571834
chr12 109232146 109232509 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057747
chr12 109232162 109232659 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571840
chr12 109232162 109232659 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057757
chr12 109232163 109232547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571843
chr12 109232163 109232547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057760
chr12 109232164 109232514 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571845
chr12 109232164 109232514 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057764
chr12 109232164 109232515 JUND UCSC Txn Factor no Conserved 108057765
chr12 109232166 109232496 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571847
chr12 109232166 109232496 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057767
chr12 109232167 109232523 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571848
chr12 109232167 109232523 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057769
chr12 109232167 109232543 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571849
chr12 109232167 109232543 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057770
chr12 109232192 109232522 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571855
chr12 109232192 109232522 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057781
chr12 109232194 109232534 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571858
chr12 109232194 109232534 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057785
chr12 109232195 109232515 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571859
chr12 109232195 109232515 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057786
chr12 109232203 109232559 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571861
chr12 109232203 109232559 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057788
chr12 109232209 109232529 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571862
chr12 109232209 109232529 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057791
chr12 109232212 109232492 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571865
chr12 109232212 109232492 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057794
chr12 109232212 109232588 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571866
chr12 109232212 109232588 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057795
chr12 109232218 109232494 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21571870
chr12 109232218 109232494 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108057799
chr12 109232234 109232511 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571879
chr12 109232234 109232511 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057808
chr12 109232234 109232551 EBF1 UCSC Txn Factor no Conserved 108057809
chr12 109232242 109232498 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571881
chr12 109232242 109232498 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057811
chr12 109232244 109232754 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21571882
chr12 109232244 109232754 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108057812
Genes associated with rs539240980[chr12:109232492], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More