EnhancerDB
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  3. rs539253874[chr1:10123804]
Enhancers that have rs539253874[chr1:10123804]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10113864 10131352 enh11492
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539253874[chr1:10123804]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10123798 10123813 MEF2C JASPAR yes 26698758
chr1 10123799 10123814 MEF2A JASPAR yes 26698759
chr1 10123800 10123812 MEF2A JASPAR yes 26698760
chr1 10123800 10123812 MEF2B JASPAR yes 26698761
chr1 10123800 10123812 MEF2D JASPAR yes 26698762
Genes associated with rs539253874[chr1:10123804], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More