EnhancerDB
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  3. rs539257899[chr2:38642041]
Enhancers that have rs539257899[chr2:38642041]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38631155 38647575 enh5424
Skin (Keratinocyte) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Placenta Breast Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Adrenal Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs539257899[chr2:38642041]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38642035 38642045 SP1 TRANSFAC yes 73138140
chr2 38642036 38642042 SP1 TRANSFAC yes 73138141
chr2 38642036 38642046 SP1 JASPAR yes 73138142
chr2 38642037 38642047 ZNF740 JASPAR yes 73138143
chr2 38642040 38642046 MZF1 JASPAR yes 73138144
Genes associated with rs539257899[chr2:38642041], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More