EnhancerDB
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  3. rs539258261[chr1:8788462]
Enhancers that have rs539258261[chr1:8788462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8756385 8790235 enh11474
Brain (SK-N-MC) Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539258261[chr1:8788462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8788451 8788467 RFX2 JASPAR yes 26592634
chr1 8788451 8788467 RFX3 JASPAR yes 26592635
chr1 8788451 8788467 RFX5 JASPAR yes 26592636
chr1 8788462 8788465 MYB TRANSFAC yes 26592637
Genes associated with rs539258261[chr1:8788462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More