EnhancerDB
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  3. rs539292465[chr16:89505907]
Enhancers that have rs539292465[chr16:89505907]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539292465[chr16:89505907]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89504869 89509425 ZNF274 GTRD no Bone Marrow (K562) 108226209
chr16 89505087 89509303 ZNF274 GTRD no Bone Marrow (K562) 108226210
chr16 89505120 89509396 ZNF274 GTRD no Bone Marrow (K562) 108226211
chr16 89505898 89505908 CLOCK JASPAR yes 12344413
chr16 89505898 89505908 MYF6 JASPAR yes 12344414
chr16 89505900 89505911 TBX2 JASPAR yes 12344415
chr16 89505901 89505911 TBR1 JASPAR yes 12344416
chr16 89505901 89505916 HNF4G JASPAR yes 12344417
chr16 89505901 89505916 NR2C2 JASPAR yes 12344418
chr16 89505902 89505916 RXRB JASPAR yes 12344419
chr16 89505902 89505916 RXRG JASPAR yes 12344420
chr16 89505902 89505917 HNF4A JASPAR yes 12344421
Genes associated with rs539292465[chr16:89505907], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More