EnhancerDB
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  3. rs539312265[chr1:226871387]
Enhancers that have rs539312265[chr1:226871387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539312265[chr1:226871387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226869466 226871812 ZNF274 GTRD no Bone Marrow (K562) 107875964
chr1 226869651 226872828 ZNF274 GTRD no Bone Marrow (K562) 107875965
chr1 226869651 226872828 ZNF274 GTRD no Bone Marrow (K562) 107875966
chr1 226869673 226873033 ZNF274 GTRD no Bone Marrow (K562) 107875967
chr1 226869673 226873033 ZNF274 GTRD no Bone Marrow (K562) 107875968
chr1 226869852 226871570 ZNF274 GTRD no Cervix (HeLa-S3) 21387084
chr1 226869852 226871570 ZNF274 GTRD no Cervix (HeLa-S3) 107875969
chr1 226869856 226871729 ZNF274 GTRD no Bone Marrow (K562) 107875970
chr1 226869856 226871985 ZNF274 GTRD no Cervix (HeLa-S3) 21387085
chr1 226869856 226871985 ZNF274 GTRD no Cervix (HeLa-S3) 107875971
chr1 226869859 226871870 ZBTB33 GTRD no Lung (A549) 107875972
chr1 226869866 226871550 ZNF274 GTRD no Blood (GM12878) 21387086
chr1 226869866 226871550 ZNF274 GTRD no Blood (GM12878) 107875973
chr1 226869905 226872309 ZNF274 GTRD no Cervix (HeLa-S3) 21387087
chr1 226869905 226872309 ZNF274 GTRD no Cervix (HeLa-S3) 107875974
chr1 226869905 226872309 ZNF274 GTRD no Cervix (HeLa-S3) 107875975
chr1 226869944 226871402 ZNF274 GTRD no Bone Marrow (K562) 107875977
chr1 226869946 226871530 ZBTB33 GTRD no Lung (A549) 107875978
chr1 226869951 226871748 ZBTB33 GTRD no Lung (A549) 107875979
chr1 226869951 226871924 ZNF274 GTRD no Liver (HepG2) 107875980
chr1 226869952 226871486 ZBTB33 GTRD no Lung (A549) 107875981
chr1 226869961 226871413 ZNF274 GTRD no Bone Marrow (K562) 107875982
chr1 226869962 226871566 ZNF274 GTRD no Blood (GM12878) 21387089
chr1 226869962 226871566 ZNF274 GTRD no Blood (GM12878) 107875983
chr1 226869971 226871827 ZNF143 GTRD no Epithelial (MCF-7) 21387091
chr1 226869971 226871827 ZNF143 GTRD no Epithelial (MCF-7) 107875985
chr1 226869979 226871674 ZNF274 GTRD no Bone Marrow (K562) 107875986
chr1 226870015 226871491 ZNF274 GTRD no Bone Marrow (K562) 107875992
chr1 226870015 226871927 ZNF274 GTRD no Bone Marrow (K562) 107875993
chr1 226870023 226871551 ZNF274 GTRD no Bone Marrow (K562) 107875994
chr1 226870026 226871450 ZNF274 GTRD no Bone Marrow (K562) 107875997
chr1 226870033 226871432 ZNF274 GTRD no Bone Marrow (K562) 107875999
chr1 226870035 226871398 ZNF143 GTRD no Epithelial (MCF-7) 21387095
chr1 226870035 226871398 ZNF143 GTRD no Epithelial (MCF-7) 107876000
chr1 226870040 226871899 ZNF274 GTRD no Bone Marrow (K562) 107876002
chr1 226870042 226871623 ZNF274 GTRD no Liver (HepG2) 107876003
chr1 226870044 226871708 ZNF274 GTRD no Blood (GM12878) 21387097
chr1 226870044 226871708 ZNF274 GTRD no Blood (GM12878) 107876004
chr1 226870050 226871511 ZNF274 GTRD no Cervix (HeLa-S3) 21387099
chr1 226870050 226871511 ZNF274 GTRD no Cervix (HeLa-S3) 107876006
chr1 226870059 226871420 TCF7L2 GTRD no Colon (HCT116) 21387100
chr1 226870059 226871420 TCF7L2 GTRD no Colon (HCT116) 107876008
chr1 226870060 226871464 TCF7L2 GTRD no Colon (HCT116) 21387102
chr1 226870060 226871464 TCF7L2 GTRD no Colon (HCT116) 107876010
chr1 226870063 226871510 ZNF274 GTRD no Bone Marrow (K562) 107876011
chr1 226870073 226871428 ZNF274 GTRD no Bone Marrow (K562) 107876013
chr1 226870075 226871510 ZNF274 GTRD no Bone Marrow (K562) 107876017
chr1 226870076 226871415 ZNF274 GTRD no Bone Marrow (K562) 107876018
chr1 226870080 226871493 ZNF274 GTRD no Bone Marrow (K562) 107876021
chr1 226870082 226871442 ZBTB33 GTRD no Brain (SK-N-SH) 21387105
chr1 226870082 226871442 ZBTB33 GTRD no Brain (SK-N-SH) 107876022
chr1 226870083 226871520 ZNF274 GTRD no Bone Marrow (K562) 107876023
chr1 226870084 226871422 ZBTB33 GTRD no Brain (SK-N-SH) 21387106
chr1 226870084 226871422 ZBTB33 GTRD no Brain (SK-N-SH) 107876024
chr1 226870088 226871844 ZNF143 GTRD no Epithelial (MCF-7) 21387107
chr1 226870088 226871844 ZNF143 GTRD no Epithelial (MCF-7) 107876025
chr1 226870089 226871412 ZNF274 GTRD no Bone Marrow (K562) 107876027
chr1 226870095 226871474 ZNF274 GTRD no Bone Marrow (K562) 107876029
chr1 226870095 226871476 ZNF274 GTRD no Bone Marrow (K562) 107876030
chr1 226870105 226871429 ZNF143 GTRD no Epithelial (MCF-7) 21387112
chr1 226870105 226871429 ZNF143 GTRD no Epithelial (MCF-7) 107876033
chr1 226870111 226871536 ZNF274 GTRD no Bone Marrow (K562) 107876035
chr1 226870111 226871779 ZBTB33 GTRD no Lung (A549) 107876036
chr1 226870133 226871544 ZNF274 GTRD no Blood (GM12878) 21387114
chr1 226870133 226871544 ZNF274 GTRD no Blood (GM12878) 107876039
chr1 226870145 226871459 ZNF274 GTRD no Liver (HepG2) 107876041
chr1 226870146 226871400 ZNF274 GTRD no Cervix (HeLa-S3) 21387115
chr1 226870146 226871400 ZNF274 GTRD no Cervix (HeLa-S3) 107876042
chr1 226870166 226871586 TCF7L2 GTRD no Colon (HCT116) 21387119
chr1 226870166 226871586 TCF7L2 GTRD no Colon (HCT116) 107876049
chr1 226870181 226871397 ZNF143 GTRD no Epithelial (MCF-7) 21387124
chr1 226870181 226871397 ZNF143 GTRD no Epithelial (MCF-7) 107876057
chr1 226870198 226871691 ZNF274 GTRD no Liver (HepG2) 107876065
chr1 226870204 226871424 TCF7L2 GTRD no Colon (HCT116) 21387129
chr1 226870204 226871424 TCF7L2 GTRD no Colon (HCT116) 107876068
chr1 226870238 226871526 ZNF274 GTRD no Bone Marrow (K562) 107876076
chr1 226870243 226871674 ZBTB33 GTRD no Lung (A549) 107876077
chr1 226870249 226871425 TCF7L2 GTRD no Colon (HCT116) 21387135
chr1 226870249 226871425 TCF7L2 GTRD no Colon (HCT116) 107876079
chr1 226870261 226871444 ZNF274 GTRD no Bone Marrow (K562) 107876085
chr1 226870262 226871452 TCF7L2 GTRD no Colon (HCT116) 21387138
chr1 226870262 226871452 TCF7L2 GTRD no Colon (HCT116) 107876086
chr1 226870369 226871418 ZNF143 GTRD no Epithelial (MCF-7) 21387156
chr1 226870369 226871418 ZNF143 GTRD no Epithelial (MCF-7) 107876111
chr1 226870556 226871566 ZBTB33 GTRD no Brain (SK-N-SH) 21387167
chr1 226870556 226871566 ZBTB33 GTRD no Brain (SK-N-SH) 107876134
chr1 226870572 226871487 ZNF274 GTRD no Bone Marrow (K562) 107876136
chr1 226870624 226871398 ZBTB33 GTRD no Brain (SK-N-SH) 21387172
chr1 226870624 226871398 ZBTB33 GTRD no Brain (SK-N-SH) 107876147
chr1 226870797 226871420 ZNF274 GTRD no Blood (GM12878) 21387182
chr1 226870797 226871420 ZNF274 GTRD no Blood (GM12878) 107876164
Genes associated with rs539312265[chr1:226871387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More