EnhancerDB
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  3. rs539365481[chr1:41856113]
Enhancers that have rs539365481[chr1:41856113]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539365481[chr1:41856113]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41856109 41856120 HOXC11 JASPAR yes 28383977
chr1 41856109 41856120 HOXC12 JASPAR yes 28383978
chr1 41856109 41856120 HOXD12 JASPAR yes 28383979
chr1 41856110 41856120 HOXD11 JASPAR yes 28383980
Genes associated with rs539365481[chr1:41856113], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More