EnhancerDB
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  3. rs539399088[chr12:65071219]
Enhancers that have rs539399088[chr12:65071219]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539399088[chr12:65071219]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65071207 65071222 MEF2A JASPAR yes 121425220
chr12 65071208 65071223 MEF2C JASPAR yes 121425221
chr12 65071217 65071221 YY1 TRANSFAC yes 121425223
Genes associated with rs539399088[chr12:65071219], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More