EnhancerDB
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  3. rs539403055[chr6:36635086]
Enhancers that have rs539403055[chr6:36635086]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36614945 36639164 enh9086
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr6 36634782 36635224 vista51756
VISTA
Transcript factors that have rs539403055[chr6:36635086]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36634837 36635262 RUNX3 UCSC Txn Factor no Conserved 108539937
chr6 36634884 36635158 CEBPB UCSC Txn Factor no Conserved 108539938
chr6 36634890 36635200 BHLHE40 UCSC Txn Factor no Conserved 108539939
chr6 36634953 36635276 PAX5 UCSC Txn Factor no Conserved 108539940
chr6 36635017 36635223 SPI1 UCSC Txn Factor no Conserved 108539941
Genes associated with rs539403055[chr6:36635086], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More