EnhancerDB
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  3. rs539409163[chr17:57830356]
Enhancers that have rs539409163[chr17:57830356]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs539409163[chr17:57830356]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57830350 57830360 ID4 JASPAR yes 55077241
chr17 57830350 57830360 TCF4 JASPAR yes 55077242
Genes associated with rs539409163[chr17:57830356], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More