EnhancerDB
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  3. rs539421840[chr1:234860791]
Enhancers that have rs539421840[chr1:234860791]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539421840[chr1:234860791]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234858649 234861065 POLR2A UCSC Txn Factor no Conserved 107881600
chr1 234860119 234860799 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21396639
chr1 234860296 234860994 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21396649
chr1 234860569 234860953 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21396652
chr1 234860629 234860874 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21396653
chr1 234860679 234860815 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21396654
chr1 234860784 234861280 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21396655
Genes associated with rs539421840[chr1:234860791], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More