EnhancerDB
  1. Home
  2. SNP
  3. rs539425814[chr17:28048733]
Enhancers that have rs539425814[chr17:28048733]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539425814[chr17:28048733]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28048725 28048737 YY1 JASPAR yes 53753445
chr17 28048725 28048742 NR3C1 JASPAR yes 53753446
chr17 28048725 28048742 NR3C2 JASPAR yes 53753447
chr17 28048727 28048742 AR JASPAR yes 53753449
chr17 28048730 28048734 YY1 TRANSFAC yes 53753450
chr17 28048732 28048738 TCF4 TRANSFAC yes 53753451
Genes associated with rs539425814[chr17:28048733], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More