EnhancerDB
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  3. rs539431121[chr1:226842493]
Enhancers that have rs539431121[chr1:226842493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226842095 226842563 vista5364
VISTA
Transcript factors that have rs539431121[chr1:226842493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226842235 226842501 ZNF274 GTRD no Blood (GM12878) 21387042
chr1 226842235 226842501 ZNF274 GTRD no Blood (GM12878) 107875905
chr1 226842376 226843005 ZNF263 UCSC Txn Factor no Conserved 107875906
chr1 226842376 226843005 ZNF263 UCSC Txn Factor no Conserved 107875907
chr1 226842491 226842497 ETS1 JASPAR yes 35828134
chr1 226842491 226842497 ETS1 JASPAR yes 118471465
Genes associated with rs539431121[chr1:226842493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More