EnhancerDB
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  3. rs539449539[chr15:67173393]
Enhancers that have rs539449539[chr15:67173393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67152440 67182466 enh3668
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539449539[chr15:67173393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67170223 67183024 ZBTB33 GTRD no Lung (A549) 108148708
chr15 67171287 67181106 ZBTB33 GTRD no Lung (A549) 108148709
chr15 67171633 67177580 ZNF274 GTRD no Blood (GM12878) 108148710
chr15 67172679 67173617 ZNF143 GTRD no Epithelial (MCF-7) 21661554
chr15 67172893 67173628 TCF7L2 GTRD no Colon (HCT116) 21661555
chr15 67173329 67177550 ZBTB33 GTRD no Lung (A549) 108148711
chr15 67173383 67173397 STAT1 JASPAR yes 24184732
Genes associated with rs539449539[chr15:67173393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More