EnhancerDB
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  3. rs539457616[chr15:42207506]
Enhancers that have rs539457616[chr15:42207506]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539457616[chr15:42207506]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42207491 42207509 RARA JASPAR yes 23004443
chr15 42207498 42207511 NR2F1 JASPAR yes 23004444
chr15 42207502 42207510 CREB1 JASPAR yes 23004445
Genes associated with rs539457616[chr15:42207506], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More