EnhancerDB
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  3. rs539484452[chr1:117387097]
Enhancers that have rs539484452[chr1:117387097]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs539484452[chr1:117387097]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117386373 117387407 ZNF274 GTRD no Bone Marrow (K562) 21333911
chr1 117386836 117387915 ZNF274 GTRD no Bone Marrow (K562) 21333912
chr1 117387057 117387734 ZNF274 GTRD no Bone Marrow (K562) 21333913
chr1 117387080 117387818 ZNF274 GTRD no Bone Marrow (K562) 21333914
chr1 117387086 117387097 NRL JASPAR yes 31843503
Genes associated with rs539484452[chr1:117387097], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More