EnhancerDB
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  3. rs539575057[chr14:68610098]
Enhancers that have rs539575057[chr14:68610098]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 68600349 68617235 enh15707
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr14 68610058 68610732 vista18189
VISTA
Transcript factors that have rs539575057[chr14:68610098]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 68607597 68610173 TCF7L2 GTRD no Colon (HCT116) 21624749
chr14 68607597 68610173 TCF7L2 GTRD no Colon (HCT116) 108108540
chr14 68607972 68610673 TCF7L2 GTRD no Colon (HCT116) 21624750
chr14 68607972 68610673 TCF7L2 GTRD no Colon (HCT116) 108108541
chr14 68609856 68610923 ZNF143 GTRD no Epithelial (MCF-7) 21624751
chr14 68609856 68610923 ZNF143 GTRD no Epithelial (MCF-7) 108108542
chr14 68609997 68610582 EP300 UCSC Txn Factor no Conserved 108108543
chr14 68610042 68610582 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108108544
chr14 68610046 68610402 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108108545
chr14 68610064 68610320 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108108546
chr14 68610089 68610101 YY1 JASPAR yes 107568783
chr14 68610089 68610101 YY1 JASPAR yes 116180846
chr14 68610093 68610108 HNF4A JASPAR yes 107568784
chr14 68610093 68610108 HNF4A JASPAR yes 116180847
chr14 68610094 68610109 HNF4G JASPAR yes 107568785
chr14 68610094 68610109 HNF4G JASPAR yes 116180848
chr14 68610098 68610104 SOX10 JASPAR yes 107568786
chr14 68610098 68610104 SOX10 JASPAR yes 116180849
Genes associated with rs539575057[chr14:68610098], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More