EnhancerDB
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  3. rs539580884[chr2:235887139]
Enhancers that have rs539580884[chr2:235887139]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235861765 235887439 enh19351
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539580884[chr2:235887139]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235887134 235887152 NFYA JASPAR yes 81925595
Genes associated with rs539580884[chr2:235887139], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More