EnhancerDB
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  3. rs539583661[chr3:150443742]
Enhancers that have rs539583661[chr3:150443742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 150436865 150479875 enh7626
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539583661[chr3:150443742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 150443726 150443742 POU4F2 JASPAR yes 6587433
chr3 150443726 150443742 POU4F3 JASPAR yes 6587434
chr3 150443728 150443742 POU4F1 JASPAR yes 6587437
chr3 150443728 150443743 HNF1A JASPAR yes 6587438
chr3 150443729 150443744 HNF1A JASPAR yes 6587447
chr3 150443730 150443744 POU4F1 JASPAR yes 6587460
chr3 150443730 150443746 POU4F2 JASPAR yes 6587461
chr3 150443730 150443746 POU4F3 JASPAR yes 6587462
chr3 150443731 150443742 PHOX2A JASPAR yes 6587465
chr3 150443731 150443742 PROP1 JASPAR yes 6587466
chr3 150443732 150443746 POU4F1 JASPAR yes 6587467
chr3 150443732 150443747 HNF1A JASPAR yes 6587468
chr3 150443733 150443743 GSX1 JASPAR yes 6587469
chr3 150443733 150443743 GSX2 JASPAR yes 6587470
chr3 150443733 150443743 LHX2 JASPAR yes 6587471
chr3 150443733 150443743 LHX6 JASPAR yes 6587472
chr3 150443733 150443743 MNX1 JASPAR yes 6587473
chr3 150443733 150443743 NOTO JASPAR yes 6587474
chr3 150443733 150443743 POU6F1 JASPAR yes 6587475
chr3 150443733 150443743 RAX JASPAR yes 6587476
chr3 150443733 150443748 HNF1A JASPAR yes 6587477
chr3 150443734 150443742 ISX JASPAR yes 6587478
chr3 150443734 150443742 LMX1A JASPAR yes 6587479
chr3 150443734 150443742 LMX1B JASPAR yes 6587480
chr3 150443734 150443742 NKX6-1 JASPAR yes 6587481
chr3 150443734 150443742 NKX6-2 JASPAR yes 6587482
chr3 150443734 150443742 PRRX1 JASPAR yes 6587483
chr3 150443734 150443742 RAX2 JASPAR yes 6587484
chr3 150443734 150443742 SHOX JASPAR yes 6587485
chr3 150443734 150443742 UNCX JASPAR yes 6587486
chr3 150443734 150443742 VAX1 JASPAR yes 6587487
chr3 150443734 150443745 PHOX2A JASPAR yes 6587488
chr3 150443734 150443745 PROP1 JASPAR yes 6587489
chr3 150443734 150443748 POU4F1 JASPAR yes 6587490
chr3 150443734 150443750 POU4F2 JASPAR yes 6587491
chr3 150443734 150443750 POU4F3 JASPAR yes 6587492
chr3 150443735 150443745 PAX3 JASPAR yes 6587493
chr3 150443735 150443745 PAX7 JASPAR yes 6587494
chr3 150443735 150443746 PHOX2A JASPAR yes 6587495
chr3 150443735 150443746 PROP1 JASPAR yes 6587496
chr3 150443737 150443747 GSX1 JASPAR yes 6587497
chr3 150443737 150443747 GSX2 JASPAR yes 6587498
chr3 150443737 150443747 LHX2 JASPAR yes 6587499
chr3 150443737 150443747 LHX6 JASPAR yes 6587500
chr3 150443737 150443747 MNX1 JASPAR yes 6587501
chr3 150443737 150443747 NOTO JASPAR yes 6587502
chr3 150443737 150443747 POU6F1 JASPAR yes 6587503
chr3 150443737 150443747 RAX JASPAR yes 6587504
chr3 150443738 150443746 ISX JASPAR yes 6587505
chr3 150443738 150443746 LMX1A JASPAR yes 6587506
chr3 150443738 150443746 LMX1B JASPAR yes 6587507
chr3 150443738 150443746 NKX6-1 JASPAR yes 6587508
chr3 150443738 150443746 NKX6-2 JASPAR yes 6587509
chr3 150443738 150443746 PRRX1 JASPAR yes 6587510
chr3 150443738 150443746 RAX2 JASPAR yes 6587511
chr3 150443738 150443746 SHOX JASPAR yes 6587512
chr3 150443738 150443746 UNCX JASPAR yes 6587513
chr3 150443738 150443746 VAX1 JASPAR yes 6587514
chr3 150443738 150443752 ONECUT3 JASPAR yes 6587515
chr3 150443739 150443749 PAX3 JASPAR yes 6587516
chr3 150443739 150443749 PAX7 JASPAR yes 6587517
chr3 150443739 150443750 PHOX2A JASPAR yes 6587518
chr3 150443739 150443750 PROP1 JASPAR yes 6587519
chr3 150443740 150443761 IRF1 JASPAR yes 6587520
chr3 150443741 150443762 IRF1 JASPAR yes 6587521
Genes associated with rs539583661[chr3:150443742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More