EnhancerDB
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  3. rs539621542[chr1:8272263]
Enhancers that have rs539621542[chr1:8272263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8240061 8281055 enh11465
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 8272041 8272390 vista242
VISTA
Transcript factors that have rs539621542[chr1:8272263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8271677 8272337 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107801968
chr1 8272256 8272271 FOXP1 JASPAR yes 26528275
chr1 8272256 8272271 FOXP1 JASPAR yes 118224684
chr1 8272263 8272275 FOXI1 JASPAR yes 26528276
chr1 8272263 8272275 FOXI1 JASPAR yes 118224685
Genes associated with rs539621542[chr1:8272263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More