EnhancerDB
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  3. rs539661966[chr19:10999522]
Enhancers that have rs539661966[chr19:10999522]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10983285 11012541 enh5003
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539661966[chr19:10999522]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10999185 10999621 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849159
chr19 10999185 10999621 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384242
chr19 10999287 10999611 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21849162
chr19 10999287 10999611 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108384245
chr19 10999303 10999623 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21849163
chr19 10999303 10999623 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108384246
Genes associated with rs539661966[chr19:10999522], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More