EnhancerDB
  1. Home
  2. SNP
  3. rs539662867[chr9:109661176]
Enhancers that have rs539662867[chr9:109661176]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 109635009 109662055 enh25840
Astrocyte Embryonic Stem Cell Line (H1-hESC) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539662867[chr9:109661176]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 109661173 109661178 ETS2 TRANSFAC yes 85992888
chr9 109661173 109661188 IRF9 JASPAR yes 85992889
chr9 109661175 109661189 STAT1 JASPAR yes 85992890
chr9 109661175 109661190 STAT2 JASPAR yes 85992891
chr9 109661175 109661193 IRF2 JASPAR yes 85992892
chr9 109661176 109661190 TCF7L2 JASPAR yes 85992893
chr9 109661176 109661191 LEF1 JASPAR yes 85992894
Genes associated with rs539662867[chr9:109661176], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More