EnhancerDB
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  3. rs539709952[chr1:43509423]
Enhancers that have rs539709952[chr1:43509423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43495245 43526835 enh11806
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Ovary Muscle (A673) Placenta Uterus Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs539709952[chr1:43509423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43509407 43509427 PPARG JASPAR yes 28481782
chr1 43509409 43509424 STAT2 JASPAR yes 28481783
chr1 43509410 43509424 STAT1 JASPAR yes 28481784
chr1 43509420 43509436 ZNF143 JASPAR yes 28481785
Genes associated with rs539709952[chr1:43509423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More