EnhancerDB
  1. Home
  2. SNP
  3. rs539727396[chr11:62277998]
Enhancers that have rs539727396[chr11:62277998]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62262575 62280595 enh13974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539727396[chr11:62277998]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62277986 62277999 NFKB1 JASPAR yes 39210831
chr11 62277997 62278010 NR2F1 JASPAR yes 39210833
chr11 62277998 62278006 CREB1 JASPAR yes 39210834
Genes associated with rs539727396[chr11:62277998], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More