EnhancerDB
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  3. rs539729188[chr15:55508749]
Enhancers that have rs539729188[chr15:55508749]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55507525 55515978 enh3597
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs539729188[chr15:55508749]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55508731 55508752 IRF1 JASPAR yes 23493382
chr15 55508732 55508753 IRF1 JASPAR yes 23493383
chr15 55508736 55508751 STAT2 JASPAR yes 23493385
Genes associated with rs539729188[chr15:55508749], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More