EnhancerDB
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  3. rs539733839[chr2:238575488]
Enhancers that have rs539733839[chr2:238575488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238567229 238591955 enh19400
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539733839[chr2:238575488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238575480 238575501 IRF1 JASPAR yes 82129547
chr2 238575482 238575497 FOXP1 JASPAR yes 82129548
chr2 238575482 238575503 ZNF263 JASPAR yes 82129549
chr2 238575486 238575507 IRF1 JASPAR yes 82129550
chr2 238575486 238575507 ZNF263 JASPAR yes 82129551
chr2 238575487 238575508 ZNF263 JASPAR yes 82129552
Genes associated with rs539733839[chr2:238575488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More