EnhancerDB
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  3. rs539738712[chr12:53962199]
Enhancers that have rs539738712[chr12:53962199]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53952154 53966435 enh2368
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs539738712[chr12:53962199]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53962179 53962200 IRF1 JASPAR yes 120992005
chr12 53962183 53962204 ZNF263 JASPAR yes 120992007
chr12 53962185 53962206 IRF1 JASPAR yes 120992008
chr12 53962186 53962207 ZNF263 JASPAR yes 120992009
chr12 53962187 53962202 PRDM1 JASPAR yes 120992010
chr12 53962188 53962209 ZNF263 JASPAR yes 120992011
chr12 53962190 53962211 ZNF263 JASPAR yes 120992012
chr12 53962191 53962212 IRF1 JASPAR yes 120992013
chr12 53962192 53962213 ZNF263 JASPAR yes 120992014
chr12 53962193 53962208 PRDM1 JASPAR yes 120992015
chr12 53962194 53962215 ZNF263 JASPAR yes 120992016
chr12 53962197 53962218 ZNF263 JASPAR yes 120992017
chr12 53962198 53962219 ZNF263 JASPAR yes 120992018
Genes associated with rs539738712[chr12:53962199], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More