EnhancerDB
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  3. rs539749623[chr15:40353922]
Enhancers that have rs539749623[chr15:40353922]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539749623[chr15:40353922]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40353500 40354184 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649571
chr15 40353553 40354183 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649572
chr15 40353630 40354146 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649573
chr15 40353638 40354228 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649574
chr15 40353661 40354071 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649575
chr15 40353675 40354085 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649576
chr15 40353692 40354076 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649577
chr15 40353709 40354039 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649578
chr15 40353710 40354066 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649579
chr15 40353712 40353966 ZNF274 GTRD no Bone Marrow (K562) 21649580
chr15 40353732 40354032 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649581
chr15 40353734 40354054 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649582
chr15 40353736 40354016 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649583
chr15 40353750 40354080 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649584
chr15 40353755 40354019 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649585
chr15 40353755 40355054 ZNF274 GTRD no Bone Marrow (K562) 21649586
chr15 40353761 40354081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649587
chr15 40353762 40354052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649588
chr15 40353762 40354072 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649589
chr15 40353765 40354045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649590
chr15 40353765 40354201 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649591
chr15 40353776 40354016 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649592
chr15 40353780 40353970 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649593
chr15 40353781 40353976 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649594
chr15 40353786 40353982 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649595
chr15 40353791 40354248 ZNF274 GTRD no Bone Marrow (K562) 21649596
chr15 40353801 40353956 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649597
chr15 40353807 40353998 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649598
chr15 40353808 40353942 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649599
chr15 40353819 40354009 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649600
chr15 40353821 40353955 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649601
chr15 40353824 40353956 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649602
chr15 40353825 40354225 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649603
chr15 40353845 40353964 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21649604
chr15 40353899 40354964 ZNF274 GTRD no Bone Marrow (K562) 21649605
chr15 40353914 40353924 RELA JASPAR yes 22924814
chr15 40353918 40353937 RFX2 JASPAR yes 22924815
Genes associated with rs539749623[chr15:40353922], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More