EnhancerDB
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  3. rs539752500[chr1:41883984]
Enhancers that have rs539752500[chr1:41883984]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539752500[chr1:41883984]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41883975 41883990 TFAP2A JASPAR yes 28387825
chr1 41883977 41883992 TFAP2C JASPAR yes 28387826
chr1 41883978 41883989 TFAP2A JASPAR yes 28387827
chr1 41883978 41883989 TFAP2B JASPAR yes 28387828
chr1 41883978 41883989 TFAP2C JASPAR yes 28387829
chr1 41883978 41883990 TFAP2A JASPAR yes 28387830
chr1 41883978 41883990 TFAP2B JASPAR yes 28387831
chr1 41883979 41883988 TFAP2A JASPAR yes 28387832
Genes associated with rs539752500[chr1:41883984], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More