EnhancerDB
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  3. rs539760972[chr1:226000393]
Enhancers that have rs539760972[chr1:226000393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225998865 226010784 enh12726
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs539760972[chr1:226000393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226000384 226000398 STAT1 JASPAR yes 35770693
chr1 226000390 226000394 YY1 TRANSFAC yes 35770694
Genes associated with rs539760972[chr1:226000393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More