EnhancerDB
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  3. rs539785633[chr17:55552049]
Enhancers that have rs539785633[chr17:55552049]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs539785633[chr17:55552049]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55552037 55552052 AR JASPAR yes 54958949
chr17 55552047 55552062 FOXP1 JASPAR yes 54958951
Genes associated with rs539785633[chr17:55552049], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More