EnhancerDB
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  3. rs539807205[chr1:226874981]
Enhancers that have rs539807205[chr1:226874981]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226874961 226875281 vista5377
VISTA
Transcript factors that have rs539807205[chr1:226874981]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226873565 226875373 ZNF274 GTRD no Cervix (HeLa-S3) 21387186
chr1 226873565 226875373 ZNF274 GTRD no Cervix (HeLa-S3) 107876175
chr1 226873586 226876636 ZNF274 GTRD no Cervix (HeLa-S3) 21387187
chr1 226873586 226876636 ZNF274 GTRD no Cervix (HeLa-S3) 107876176
chr1 226873586 226876636 ZNF274 GTRD no Cervix (HeLa-S3) 107876177
chr1 226873626 226875063 ZNF274 GTRD no Cervix (HeLa-S3) 21387188
chr1 226873626 226875063 ZNF274 GTRD no Cervix (HeLa-S3) 107876178
chr1 226873712 226876837 ZNF274 GTRD no Bone Marrow (K562) 107876179
chr1 226873712 226876837 ZNF274 GTRD no Bone Marrow (K562) 107876180
chr1 226873712 226876837 ZNF274 GTRD no Bone Marrow (K562) 107876181
chr1 226873900 226875069 ZNF274 GTRD no Cervix (HeLa-S3) 21387189
chr1 226873900 226875069 ZNF274 GTRD no Cervix (HeLa-S3) 107876182
chr1 226874471 226875224 ZNF274 GTRD no Bone Marrow (K562) 107876183
chr1 226874515 226875003 ZNF274 GTRD no Blood (GM12878) 21387190
chr1 226874515 226875003 ZNF274 GTRD no Blood (GM12878) 107876184
chr1 226874603 226875004 ZNF274 GTRD no Bone Marrow (K562) 107876186
chr1 226874618 226875208 ZNF274 GTRD no Bone Marrow (K562) 107876187
chr1 226874971 226874981 ELK1 JASPAR yes 35833061
chr1 226874971 226874981 ELK3 JASPAR yes 35833062
chr1 226874971 226874981 ETV3 JASPAR yes 35833063
chr1 226874971 226874981 ELK1 JASPAR yes 118472226
chr1 226874971 226874981 ELK3 JASPAR yes 118472227
chr1 226874971 226874981 ETV3 JASPAR yes 118472228
chr1 226874973 226874987 POU4F1 JASPAR yes 35833064
chr1 226874973 226874987 POU4F1 JASPAR yes 118472229
Genes associated with rs539807205[chr1:226874981], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More